MEDICAL · 25 PROJECTS

Health, diagnostics, and the rest.

Every health-adjacent project I've built or have in flight. Grouped by the four broad areas: genome work, health-data integration, advanced analysis & detection, and diagnostics.

GENOME WORK

PluribusGenomic analysis and health optimization — variant enrichment with clinical and evolutionary context, plus deep-learning pathogenicity prediction.
Active
GeneDropPersonal genomics — upload raw VCF / BAM / FASTQ / 23andMe data and check for specific mutations, locally.
Active
genes — HLA typingHLA typing pipeline wrapping hisat-genotype and HLA-LA for class I and II from short or long reads.
Active

HEALTH-DATA INTEGRATION

HealthySelfPulls Oura, OSCAR CPAP, and pulse-ox data into one timeline and surfaces what actually changed.
Research
CoreDrilliOS app for collecting RR-interval and heart-rate data from a Polar H10 over BLE.
Active
PolarCollectoriOS app for real-time RR-interval and heart-rate capture from Polar H10 sensors.
Active
qhintQHIN onramp via Redox Health — patient records across Carequality / TEFCA-aligned networks.
Active
SNOAPIMinimal SNOMED CT terminology access via UMLS REST and CTS FHIR.
Active
mLabExtracts analyte results from PDF lab reports — normalize and compare against reference ranges.
Active
MDableConverts PDF lab reports into OCR-ready PDFs and then into Markdown for downstream parsing.
Active
ReductiveLiteratureAI agent that parses clinical lab PDFs into structured data using local LLMs or cloud APIs.
Active

ADVANCED ANALYSIS & DETECTION

CPAP AnalyzerMultimodal CPAP / OSCAR analyzer — signal processing, phenotype classification, ML-driven intervention analysis.
Active
SteadySleepMulti-source data integration and ML for dysautonomia detection — wearables and medical devices onto a single timeline.
Research
ScatFatAutomated visceral adipose tissue (VAT) quantification from full-body MRI scans.
Research
CoreSamplesHRV spectral analysis on Polar H10 RR intervals — sleep arousal detection and autonomic-state inference.
Active
oxyCleanCPAP / BiPAP analysis — respiratory rate variability, flow stability, breath-detection validation.
Active
dysauto-detectorSpectral analysis of continuous cardio biomarkers for dysautonomia detection.
Research
ageinBiological-age estimation from lab biomarkers via pyaging; age-delta scoring.
Active
ComparativeLiteratureML system for longitudinal lab results — CatBoost / XGBoost / LightGBM with anomaly detection.
Active

DIAGNOSTICS

Zebra DiagnosticsGraph-native diagnostic decision support — Bayesian inference over a clinical knowledge graph.
Research
brayBayesian inference microservice — patient-specific posterior probabilities over clinical problems.
Active
docdocGraph-native clinical decision-support frontend — React Brief Studio over a node/edge clinical KG.
Active
ligatureControl plane orchestrating Docker-based medical microservices — health checks and service discovery.
Active
kag-icdCohortX Task 3 — resolving free-text medical conditions to ICD-10-CM codes.
Research
ddxFlowDiagnostic flow / differential-diagnosis workspace.
Active